Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs4608293 | chr15:24536113 | T/A | 3.24E-5 | 211 | 17.52 | 14.03 | 10.23 | KM Plot |
| KIRP | rs4626556 | chr8:30100841 | G/A | 5.69E-7 | 213 | 15.07 | 18.47 | 0.07 | KM Plot |
| KIRP | rs4628578 | chr10:70712169 | A/G | 8.57E-9 | 213 | 14.87 | 18.03 | 9.77 | KM Plot |
| KIRP | rs4631 | chr5:176733116 | A/G | 7.98E-7 | 206 | 4.88 | 19.27 | 15.75 | KM Plot |
| KIRP | rs4635117 | chr11:116981001 | A/G | 0.000349 | 209 | 11.43 | 14.1 | 16.43 | KM Plot |
| KIRP | rs4655901 | chr1:89572057 | A/T | 3.83E-5 | 210 | 9.77 | 19.92 | 14.53 | KM Plot |
| KIRP | rs4655902 | chr1:89600307 | A/G | 9.99E-5 | 211 | 10 | 19.47 | 14.1 | KM Plot |
| KIRP | rs4655903 | chr1:89602691 | G/C | 0.000106 | 209 | 10.23 | 19.47 | 14.03 | KM Plot |
| KIRP | rs4656093 | chr1:89571975 | C/T | 3.83E-5 | 210 | 9.77 | 19.92 | 14.53 | KM Plot |
| KIRP | rs4656094 | chr1:89576509 | C/T | 3.27E-5 | 212 | 9.77 | 17.03 | 16.7 | KM Plot |
| KIRP | rs4656095 | chr1:89578808 | C/T | 6.95E-5 | 214 | 9.77 | 19.53 | 14.7 | KM Plot |
| KIRP | rs4658162 | chr1:89893023 | T/G | 0.000511 | 213 | 13.03 | 13.5 | 16.77 | KM Plot |
| KIRP | rs4659923 | chr1:235709519 | C/T | 6.0E-5 | 214 | 13.67 | 17.6 | 14.85 | KM Plot |
| KIRP | rs4690187 | chr4:703813 | C/T | 0.000193 | 204 | 14.83 | 20.65 | 15.07 | KM Plot |
| KIRP | rs4703378 | chr5:34529613 | A/G | 1.18E-5 | 214 | 16.73 | 12.63 | 2.13 | KM Plot |